YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29542188, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKTSEGLKL VILRNAFYRD NYRRAIIVLL FALIINCGLA FMIFYKWMYP PQPEYFATTA  60
   61 DGRIIMLHPL SDPVLPDDFV LQWSTDAVRK AFSLDYEHWR EQLQEASNNF TPDGWKWFLN 120
  121 SLKSTNNLKT LVDLKMVSNA TVTGAPTVVR KEVVGGHFAW NIKMPLLVTY TSEGHTINMP 180
  181 MEVTLIVVRM PTQDYPQRIA INNFLAQTVT PNAVDNSV

Type	Start	End	Confidence
Cytoplasmic	1	24	0.89
Transmembrane Helix	25	45	0.94
Non-Cytoplasmic	46	218	0.93