YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29654878, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISLILYTAS RFLLAIMLLF SLWVLFRGHN SPGGGFIAGL ISASAFALYL ITHGSKDLRR  60
   61 LLRFSLSSLL AIGLTVAVLA GLIALIFGKT FLTGIWLILT THFKLGTPLL FDVGIYLVVL 120
  121 SSTLIIMIAL EEGAG

Type	Start	End	Confidence
Cytoplasmic	1	6	0.95
Transmembrane Helix	7	26	0.93
Non-Cytoplasmic	27	33	0.79
Transmembrane Helix	34	53	0.95
Cytoplasmic	54	65	0.85
Transmembrane Helix	66	88	0.91
Non-Cytoplasmic	89	108	0.81
Transmembrane Helix	109	130	0.91
Cytoplasmic	131	135	0.90