YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29654877, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLFCWMIG GLFAISIYLL LSQQLMRWLF GIVILSSSTN FVLLIVGRLS QVPPFVSPEK  60
   61 TSSLASVANP LPQALILTAI VIGFGLLSFA LVLVRKVWRQ FKTLDSDKLR LAEPVPHREK 120
  121 IAS

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.85
Transmembrane Helix	4	21	0.87
Cytoplasmic	22	27	0.78
Transmembrane Helix	28	49	0.88
Non-Cytoplasmic	50	73	0.89
Transmembrane Helix	74	94	0.95
Cytoplasmic	95	123	0.96