YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29654874, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIFGVSIFY VPLVILCLAV VACFTRMVIG PALSDRVIAL DLTASLLISI IAVYSLISKQ  60
   61 AVYIDVVIAL ALIVFLGTVA FAQYIEWQRY KKIKKEKRDD

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.88
Transmembrane Helix	8	29	0.95
Cytoplasmic	30	36	0.91
Transmembrane Helix	37	57	0.94
Non-Cytoplasmic	58	65	0.70
Transmembrane Helix	66	85	0.96
Cytoplasmic	86	100	0.93