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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29654798, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMNTTKHQL TLKNMHCASC VASIESALKS VAGVKSVSIN FATKQAEVEG DVDVKTILKA  60
   61 IKDQGYEAEI AGDDEEAQNE AQSHFRDLLK KAIFAAVVGF PLMINEFWAW LPSVNQPRIQ 120
  121 WVWVIIGVLS FFVLYYCGGH IYRGAWRAFL KRQTNMDTLV AMGTGTAWLY SFVVVLIPMW 180
  181 IPPMARHAYF DTSTILIAFI TFGAALEIRA RGKTGEAIKR LIGLQPKTAR VIRDDQEIDI 240
  241 PIAEVQIDDH LRVRPGEKIP VDGKIIKGAS PIDESMLTGE PLPVVKSQGD EVIGGTINKS 300
  301 GTFIYRATRV GKDTALAQII ALVKRAQNSK PKIGRIVDKV SAVFVPVVII VAILTAIGWL 360
  361 NFGPEPKAAF VLITTVAVLV IACPCALGLA TPISIIVGVG KGAEMGVLIR NGDALQMASQ 420
  421 LTAIILDKTG TVTEGKPMLS DFYTADGFDE KKLLSIAASV EKGSEHPLAN AIIEGAKKYN 480
  481 IPLAKATQFE SIAGHGVKAK IENQSILLGN LHLMKNEKVE LGGAPAHAER MADQGQTPIY 540
  541 IALDGKIAGI VSIVDPIKPD SQKAIADLQR AGLKVVMVTG DNPLTANAVA KQVGIEQVIA 600
  601 EVLPEDKAKK VKLLQQQGER VAMVGDGIND APALAAADVG FAIGTGTDVA IESADIALIS 660
  661 GSLTGVVNAI SISRATLRNI KQNLFGAFIY NTLGIPIAAG VFYPLTGLLL SPIIAGAAMA 720
  721 LSSVTVVANA NRLRFFRRRK RT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle