YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29542063, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVDFAFYLT VAVILTGVIS FIDKLFLKKR RSPKAKASLS IEYAKTFFPV LLIVWVVRSF  60
   61 IIQPYHVPTG SLEPTVMPGD FIAVEQFAYG LRLPVLNKKI LPISEPKRGQ IALFRWPKDP 120
  121 KIVFVKRVIG LPGDHIVYKN KRLYINGQEQ KQNFLYKTND VSSWGYRRIV NVKEENLDGV 180
  181 KHKIYVQPAG GETEDYNLVV PPRHYFMMGD NRDNSDDSRQ WGFVPEKDLI GKAFGIWMSW 240
  241 DKLLNRIRWD RIGNAL

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.92
Transmembrane Helix	6	27	0.93
Cytoplasmic	28	42	0.95
Transmembrane Helix	43	62	0.84
Non-Cytoplasmic	63	256	0.84