YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29542028, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGNYAKDVL AIGLTLIMAM MLTILPLPAW AVWYQPAWIF MVLLFWMIAL PYRVGIGAAF  60
   61 IWGLLFDLLS GTILGQHALI FTIIAYFIIR FQTPLRSLPN WQQMILVFIA TAVYLALQYW 120
  121 IMAMADASPE TAKYWLPLMS TTLLWPWVRV LLKDYQSRFR LG

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.69
Transmembrane Helix	9	33	0.86
Cytoplasmic	34	41	0.52
Transmembrane Helix	42	65	0.81
Non-Cytoplasmic	66	72	0.51
Transmembrane Helix	73	91	0.90
Cytoplasmic	92	100	0.68
Transmembrane Helix	101	123	0.87
Non-Cytoplasmic	124	131	0.70
Transmembrane Helix	132	151	0.86
Cytoplasmic	152	162	0.77