YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29541848, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEINHARRS SDILKEIAQH KPDGKITYHD ILQKLGYRAF GLVLLFFALP SALPFSAIPG  60
   61 VSFIFSIPIA IFAFQMIIAQ KALWLPKFIG ERTIPYEKVS KIIHKVSPFL IKIEHLLKPR 120
  121 LYFMTKGFMK IMSGVVLFCL AIFLTLPIPF SNFLFALLII VISLGLIEKD GLFIILGYIG 180
  181 TALYISFMYV FIFGAIKALF

Type	Start	End	Confidence
Cytoplasmic	1	34	0.97
Transmembrane Helix	35	55	0.89
Non-Cytoplasmic	56	62	0.60
Transmembrane Helix	63	84	0.87
Cytoplasmic	85	127	0.96
Transmembrane Helix	128	162	0.78
Non-Cytoplasmic	163	171	0.51
Transmembrane Helix	172	196	0.87
Cytoplasmic	197	200	0.57