YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29654445, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAMERAIFI VLVSLLGASI AFGADSPNEY YGTGLCGKSG FECIKVQRGQ SWQNLFPDEN  60
   61 QRDLVQRLNR TDTYLYPGKT LAVPKDLKDA TIYSISPFPL RIKKLGEKLI MVNQDQLAWG 120
  121 AYDPEGQLIK WGPISSGKNY CRDVNRSCET ITGIFYVFHK KGPGCKSNVF PVETSGGAVM 180
  181 PYCMFFFKGY ALHGSNEVTG YRDSHGCVRL FKRDAKWLNE NFVNVATKDG HLGTKVVVEK 240
  241 LTMENSGR

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	248	0.99