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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29654427, gi|...
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKTFQRESL EFDVLIVGAG PAGLSAAIRL AQENRSLSIA VLEKGASVGA HILSGAILEP  60
   61 RALNELIPDW SKRNAPVHVA VQEDQFYLLT AKKSFRLPTP ITMRNSGNYI ISLGRFCQWL 120
  121 GEQAESFGVN VFPGFAAAKV LFDPNGAVIG VQTGDMGLDK EGRPTDSYQP GLNLYAKQTL 180
  181 FAEGCRGSLT EELIRHFNLR KNSDPQTYGI GIKELWKISP EKYKKGLVVH TVGWPLDSKT 240
  241 YGGSFVYHYE NNLLAIGLVV GLDYQNPYLD PFKEFQRFKT HPLIRHLLED GECIGYGARA 300
  301 LNEGGFQSIP TLTFPGGMLI GCSAGFLNVG KIKGSHTAMK SGMLAAETLL QTKTLEPAQE 360
  361 LKNYSTALKR SWVYKELNRV RNLRPAFRKG LWAGLLYSAF DQFILRGKAP WIFHHQPDYR 420
  421 ALKPAKICRK IAYSKPDGKL TFDKLTQVYL TGTQHRENEP CHLWVKNQKV ETDITIPVYA 480
  481 APEQRYCPAN VYEIIEKNGK PCLHINASNC IHCKTCDIKD PSQNIRWVVP EGGDGPNYSN 540
  541 L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle