YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29654406, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFDFLNILS LLTIFAGVVW LVDILWRRIK KIPIEKGTKP PLIIDYARSF FPILLIVLII  60
   61 RSFLFQPYRV PTGSLEPTIM PGDMILVNQY DYGLRVPLWN KKIVDVGEPK RGQIALFRWP 120
  121 VNPAATFVKR VIGVPGDRIS YQDKVFYING KEMSQKFIKN TLEIGDDGKT WPAKEYEEDL 180
  181 NGVKHLIILR PDKPAQNFKD LIVPKGKYLM IGDNRDDSDD SRSWGFVPAR NFIGRAILIW 240
  241 MSWDSQKDRV RWERIGDRL

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.93
Transmembrane Helix	6	26	0.93
Cytoplasmic	27	45	0.90
Transmembrane Helix	46	65	0.93
Non-Cytoplasmic	66	259	0.96