YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29654404, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIIINAVL ITLSLSITSL SISATHPSQN TIFQVATIGS LAQGVYDGDF TYGKLQKKGN  60
   61 FGLGTFLDLN GEMVAVDGHY YEIEANGKLR PVTTKQIAPF AEVTFFNPTI HKTIENAANY 120
  121 QQLGHQLSKF FLNKNIPYAI RIDGTFKTLR LRSLRKQQKP YPTLVQASEK QAIFNLNNVK 180
  181 GTVVGFWFPS YWGGIAVAGF HLHFVTADRT TGGHVLEIAL NQGKVSLAPV HQLDIYLPET 240
  241 KSFAHANLSS EELHSAIKKA EGGSE

Type	Start	End	Confidence
Signal Peptide	1	24	0.97
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	265	0.95