YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29541512, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKRKFILLS ALIFFLSAWL LLDNSSARAV QQPSWVVWVK QLREEAISRG IRPEVFDRAF  60
   61 STVKEPSRKV MHLERTQPER RITFLKYRST RADPFRIRIG RAKYQKHHRI LTEIGNKYGV 120
  121 NPCFIVSLWG METSYGSYMG NFPVIQSLAT LAYESQRRAF FRKQLFYALE ILNGGHVTLQ 180
  181 NFKGEWAGAS GQPQFLPSSW HNYAVDYDGD GRKDIWNDLP DAFASIANYL AKHGWKAHQP 240
  241 WAIEVILPSG FDTRLVNGKI KKTIQEWQRM GIRTVGGRPW PHGNEEAELI RPDGGPNFLV 300
  301 FNNFNVLMKW NRSTYYAGTV GWMAEQICGR PIQ

Type	Start	End	Confidence
Signal Peptide	1	29	0.97
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	333	0.99