YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29654198, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNNVIIIGI SGPSASGKSL LANTIVNELG SDQVVVISED SYYKDLGDMP FEERAKINYD  60
   61 HPDSLDHELL YQHLLQLQQG NAIAVPCYDH SRHRRLEKTK TVGRHRIIVL EGILLFVEAQ 120
  121 LREIMDIRIF MDTPLDICLL RRLQRDIVER ERSLEGVLTQ YQETVRPMYL QFTEPSKRYA 180
  181 DIIVPRGGEN RIAIEMIQAK MRELLGVNGA LKRHA

Type	Start	End	Confidence
Signal Peptide	1	17	0.68
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	215	0.99