YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LPXD_COXBU
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRGLTYSLT ELATAIGATV QGDGDCKIHN VAAIAQAQPG EISFVTDRKY RKYLTQTKAS  60
   61 AILLDEKLAS RCPINALVMS NPKLGFAKLL TLLRPQSLPT GGIHPTAVVG ANCQIDPSAH 120
  121 IGAHVVIEED VVIGPRTLIG AGASIGRGSQ IGSDCCLHSR VTLYSQTRIG DRSIIHSGAV 180
  181 IGADGFGLIQ DEKGEWVKIP QVGRVIIGDD VEIGANATID RGALDDTVIG NGVKIDDLVM 240
  241 IAHNVRIGDH TVIAGCAGVA GSTTVGRHCM IGASAGLNGH IEICDNVIIT GMGMIQKSIT 300
  301 KPGIYSSGTG MQTNREWRKS VIRFWQLDEL AKRLKRLEKL IR

Type	Start	End	Confidence
Signal Peptide	1	22	0.66
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	342	0.99