YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29541151, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNWLQRGFC ALLLLFATPI LGAEMKKQST VAQKEKTFIN YMAKHYHFKR EKLVAALSQA  60
   61 KYDEEVIFHI THPYEEKPWD VYRHYFITEK RIQDGINYWK VHAKALEYAE RRYGVPPAVI 120
  121 VAIIGIETNY GERIGKYSAL NALTTLAFHY NHRTKFFTRE LAQFFLLIEE QRLPLPLVRS 180
  181 SYAGAIGIPQ FMPSTYRHYA VTYAKQGHID LMNNDEDAIV SIANFLHAHG WHKNQSIACA 240
  241 FTSKKPLDPQ LISKRAIPKI SIKQLKNKGI IPSAPIPDTK KAAIVQLKME NGDEKWLVFA 300
  301 NFDVIMRYNP RIIYAMTVYQ LSQALQKRYD QQTP

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	334	0.99