YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29541094, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKAIRKVGL FVIGILVILP FQSGAHTHTK TTSQLKNSRN DCRHIKRYDK KTKHYYNVVV  60
   61 CKHATPPPPS FEEKLQEILS NLTPAQQSLL EKRLARQRQV TKTRAGISFY EPTYILPYYY 120
  121 TGRPYHSIYE GNTPENQQLD HQEFKGQMSF QFPIWYDMFG SNLSLDISYT QLSYWQFYAK 180
  181 SQFFRETNYE PQLFLSDHFS PNGLAAIGIN HQSNGRGGNL ERSWNRLFLD FTFTGAHWMV 240
  241 DVKPWILIFK AESSDLHNPD IYRYLGYGRV VFAVTFHRQV LSLMLRNTVE SGFKRGAIEL 300
  301 SYSFPIHGLL HGYIQFFSGY GQSLIEYNHY TNSVGVGIII SNWI

Type	Start	End	Confidence
Signal Peptide	1	27	0.94
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	344	0.99