YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29541021, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFIQNSVMR VNLSGFSLLE LLIAMAMAAI LTVIAYPAYR YYLVAANRRS AEVGLLRIAS  60
   61 RLEEFHSLNE TYQGATLSHL KIENESRDYL FQLSQLTTES YLIKAIPQAK QAADHCGTLS 120
  121 IDQSGHQKAS ESGCWN

Type	Start	End	Confidence
Non-Cytoplasmic	1	17	0.62
Transmembrane Helix	18	39	0.84
Cytoplasmic	40	136	0.65