YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29653514, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRNRTAGFT LMELLIVIAI IGILIIIAIP SYHTYTRRAH FTEVVQATAP YKLGVKECYQ  60
   61 MTNDLSECSA GDNGVPPAIA SGSGTGLVDA IEIQNGVITV TPQVKYGIEA KDNYILTPTP 120
  121 EREGLTWASS GGGVAAGYAN

Type	Start	End	Confidence
Cytoplasmic	1	8	0.80
Transmembrane Helix	9	32	0.87
Non-Cytoplasmic	33	140	0.83