YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MRAY_COXBU
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.92
Transmembrane Helix	21	40	0.95
Cytoplasmic	41	69	0.90
Transmembrane Helix	70	90	0.91
Non-Cytoplasmic	91	96	0.81
Transmembrane Helix	97	114	0.97
Cytoplasmic	115	133	0.90
Transmembrane Helix	134	153	0.93
Non-Cytoplasmic	154	171	0.79
Transmembrane Helix	172	191	0.91
Cytoplasmic	192	199	0.75
Transmembrane Helix	200	220	0.91
Non-Cytoplasmic	221	232	0.79
Transmembrane Helix	233	256	0.88
Cytoplasmic	257	262	0.87
Transmembrane Helix	263	284	0.91
Non-Cytoplasmic	285	289	0.82
Transmembrane Helix	290	311	0.91
Cytoplasmic	312	339	0.89
Transmembrane Helix	340	358	0.96
Non-Cytoplasmic	359	361	0.66

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLWLTNFLS QHFHAFRVFN YLTFRSIVSA LTALILVLSL SPRLIKYLVS LQVGQMVRND  60
   61 GPQTHLKKSG TPTMGGVLII VAIVISVLLW GDLSNRFIWV ILLVTVAFSA IGWMDDYRKI 120
  121 IRKNSKGLSA RSKYLLQSII GALAAVYLYF SATTGAETAL VIPFLKNVLP NLGLFYIVLA 180
  181 YFVIVGSSNA VNLTDGLDGL ALMPTVMIGA ALGVFAYTTG NHFFAQYLAI PYIPGAGEVV 240
  241 VFCSALVGAG LGFLWYNTYP AQVFMGDVGS LGLGAALGVT AVVVRQELVY FLMGGIFVAE 300
  301 TLSVILQVGY FKLSGGKRIF RMAPLHHHFE LKGWPEPKVI VRFWIITFIL VLCGLATLKL 360
  361 R