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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29540707, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIMANQATS RRQLYRWSGW FFVANTFLYF LIGLNYLLYL PDFNTIPLMT RAGVILGWVF  60
   61 MLTGLLGQLA LVAFLCCIPV LLIISCIPRR AVAFGAGVLM AAAAALFLIA DAVIYHLYHY 120
  121 HLAGVVWQII RAGVFTQVLE LSWVEWASIA FLALILIILE GLIAFIIWRK VRRKPKLNGG 180
  181 MMGVVFAASL FLSYTLTLNT SMAVTEDASA QSNDHVLVME AQVIPYYNTV LGFLLPGKNS 240
  241 ELKLQTRDDG YFVQNSQVVK SLNYPLHPLQ CRLPQKPYNI VVIALDAWRF DMLNPDVTPN 300
  301 IYNFSKKAWV FKNNLSGGNC TRPGIFSLFY SIPANYWSAV LAQHRSPVFI HQLLQDHYQM 360
  361 GIFRSASLHY PAFDQTVFRE VKNLQINTPG AESFDRDRRI THEFKNFINH RDPNRPFFSF 420
  421 VFYDETHNYC ESSANYPQPF QPAVKVCNRL LLNNHTNPLP YLNRYRNAGH FDDALTGQVL 480
  481 QTLKTNHLLK NTIVIITADH GEEFNESHQN YWGHASDYTP WQIHTPMIIY WPGKKPQVFN 540
  541 YRTSHYDIVP TLMQSALGCQ NPTTDYSVGT PILKKGQRPF LITNSYIDYA IVKPNRVTRI 600
  601 YPAGNYAILY PTGKPIPGAS LNAKTLSEVF GVLNKYFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle