YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29653414, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRGLKFRKI KGLISISMLV LLALTNSAAY GQTSPHHPDV NYEESRYYGA HLCAYSEFTC  60
   61 IAVKPGDTWT KLFPNKRERE IVKRLNRTNM ALSNRHWIVV PTELTEVEYL DLSPFPPNIH 120
  121 PTHQKLLVVN LGLHAFAAYD EKGQLVHWGP VSGGQEWCSD VGRKCNTVVG NFRIVRLGGP 180
  181 ECVSNKFPVE TEGGAPMPYC MFYFRGYALH GSTLPGYHAS HGCIRLFHDD AKWLNKHFLN 240
  241 VGTQIIVTR

Type	Start	End	Confidence
Signal Peptide	1	31	0.98
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	249	0.99