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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|227554087, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRPKGGPM GGGPGRNIGA KGPKPKNFWK TVKRLFRYMS KRMLSIIAVL VLAIAAVVFQ  60
   61 IQTPKVLGQA TTEIFKGVMK GAAEMKQGLK ITSFPIDFDK IGQILLIVIA MYLISAVFNF 120
  121 LQQVIMTRVS QRTVYELRQE LEAKMNKVPI SYYDTHSNGD IMSRAINDMD NIASTLQQNL 180
  181 TQLITSIVTF VGVLWMMLTI SWQLTLIALA TVPLSLIVVM VVAPRSQKHF AAQQKSLGLL 240
  241 NNQVEETYGG HVVVKSFNHE ESDQEVFEKE NEKLYHAGRK AQFISAIIMP LMNFIKNLGY 300
  301 VFVAVLGGVK VANGMMDLGD VQAFLQYTNQ FSQPITQIAN LMNTIQATVA SAERVFEVLD 360
  361 EEEMVDEPSG IPVETDSPYR VSFEHVAFGY SPEKLLMKDF NLNVKPGEMV AIVGPTGAGK 420
  421 TTLINLLERF YDISSGSIKY DGVDTRDLSR EELRAHFSMV LQDTWLFTGS IYDNIHYGNE 480
  481 QASEEEVIRA AKAAHVDDFV RKLPEGYQTI LNEEASNISQ GQRQLITIAR AFLANPDVLI 540
  541 LDEATSSVDT RTEILIQAAM NRLLENRTSF VVAHRLSTIR DADTIIVMAE GSIVETGTHD 600
  601 ELMAKNGFYA DLYNSQFSEE VA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle