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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|238857277, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVLMGVLS LGLLLGAATG CTSDQEKAAG KTKASSEKTE ATSGASANGY TDPSELKDSY  60
   61 DVVIVGSGGA GMTAALQAKE AGMNPVILEK MPVAGGNTIK SSSGMNASQT KFQEKEGIKD 120
  121 SNDKFFEETL KGGKGTNDQE LLRYFVDHSA EAIDWLDTKG ITLSNLTITG GMSEKRTHRP 180
  181 ADGSAIGGYL VDGLVRNVRE EKIPLFVDAD VTDLVEENGQ IDGVKVKMKD DKEKTVKAKA 240
  241 VVVTTGGFGA NEKLITQYKP ELKNYVTTNQ EGTTGDGIQM IQKVGGALVD MKEIQIHPTV 300
  301 QQSDAFLIGE AVRGEGAILA SQKGERFVNE LDTRDKVSAA INALPEKSAY LVFDQGVRDR 360
  361 AKAIDFYDQK GFVEKGETIE ELAEKIGMPA DTLKATIDTW NQDVNAKDDK QFGRTTGMEA 420
  421 DLSTAPYYAI KIAPGIHHTM GGVKINTKTE VLREDGTPIK GLYAAGELTG GLHGQNRIGG 480
  481 NAIADIIIYG RQAGTQSAEF ASAQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle