YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29375457, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAYKQSVDT VTKEVSVNTE TGLTQQEAQQ RLKENGRNQF EEAKKDSVLK KFIHSLSDFT  60
   61 TIILLVAAAI SFYTAIVTEH GEYFEGILII AIVIINAVLA IVQEGNAEKS LAALQDMNKQ 120
  121 SSAVLRDGKV IEVDAEELVV GDVLVLEAGS MITADARLIQ ASQMRVEESA LTGESEPVEK 180
  181 DPTYVGHDDD GLGDQINMIF KGCTVVNGRG RAVVTATGMN TEMGKIAGLL NNSDQQKTPL 240
  241 QKRLNQLGKR ISLLALGAAA IVFIIGELQG EPLLEMFMTA VSLAVAAVPE TLTVIVTLTL 300
  301 AYGVQKMAKK HAIIRRLPAV ETLGTANVIC SDKTGTLTQN KMRVRRVWHR GDEVTDTEDA 360
  361 MTDEAMEVLK MAALCTDVIV EKEGDELTVT GNPTEAAIVR AVEENYHTKE ELEEKYPRIG 420
  421 EIPFDSERKM MTTVHQWGKK YISITKGAFD VLLPRFGFGD VDQAAIVNDR FGKRALRVIA 480
  481 VGYAVYDEPP KEITSEALEK NLRLLGLIGM IDPPRPESKG AIARAKKAGI KTVMITGDHV 540
  541 VTASAIAKEL GILKDKSEAL SGSELKKMSD EELDKRVKDL SVYARVTPED KIRIVQSWQR 600
  601 SGAVVAMTGD GVNDAPALKA SDVGCAMGIT GTDVAQGASD MILTDDNFAT IVDAVAQGRA 660
  661 VYRNIRKAIN FLLSCNISEI FIVLIAMLLG WGAPFTAVQL LFVNVVADGL PGFALGKEPA 720
  721 EKGIMDEAPI PKNEGIFARG LWQKIGINAA VFTVITLFGF YLGAFVPGVS AYVSNSYEVG 780
  781 QTVAFLILAY SSILHVFNVR SANSVFRVKL SSNKSLFEMV VLALLITTTI ALLPFTQELF 840
  841 GLVHISLNHW MLAIFLSFVP IFVNEMIKFH FSEVEEEEEV I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle