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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29347289, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDFLKFTLA TVTGIILSSI VLFIIGMVTL FGIVSTADTE TIVKKNSVMM LDLNGVLVER  60
   61 TQESPLGILS QLFSDDSNTY GLDDILSSIK KAKENENIKG IYLQASMLGT SYASLQEIRN 120
  121 ALLDFKESGK FIIAYGDSYT QGLYYLSSVA DKVLLNPKGM IEWKGIASAP LFYKDLLQKI 180
  181 GVEMQIFKVG TYKSAVEPFI STEMSPANRE QVTAFINSIW GQVTEGVSAS RSLPVDSLNA 240
  241 LADRMLMFYP AEESVQCGLA DTLIYRNDVR NYLKQWVDLK EDDRLPVLGL SDMINVKKNM 300
  301 PKDKSGNIVA VYYASGEITD YSGSSTSEEG IVGTKVIRDL RKLKDDEDVK AVVLRVNSPG 360
  361 GSAFASEQIW HAVKELKTEK PVIVSMGDYA ASGGYYISCV ADTIVAEPTT LTGSIGIFGM 420
  421 VPNVKELSEK IGLTYDVVKT NKFSDFGNIM RPFNQDEKTL MQMMITQGYD TFVNRCAEGR 480
  481 HMSKEAIEKI AEGRVWTGEA AKELGLVDVL GGIDTALEIA VRKAGIEGYT VVSYPAKQDL 540
  541 LSSLLNTKPT NYVESQILKS KLGEYYQQFG MLKNLKERSM IQARIPFELN IK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle