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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29338900, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSELGTGE KGVIVKVLGH GGFRKRIVEM GFIKGKTVEV LLNAPLKDPI KYKVLGYEIS  60
   61 LRRQEAEMIE VVSEEEAKKQ AEKAVYHEGL PEDVSVKEED MKRLALGKRR TINVALVGNP 120
  121 NSGKTSLFNL ASGAHEHVGN YSGVTVDAKE GYFDFEGYHF RIVDLPGTYS LSAYTPEEIY 180
  181 VRRHIVDETP DVIINVVDSS NLERNLYLTT QLIDMNVRMV VALNIYDELE SSGNTLDYHL 240
  241 LSKLFGVPMV PTVSKKNRGL DTLFHVVINL YEGVDFFDKQ GNMNPEVLKD LTEWHDSLED 300
  301 RKNHEEEHLE DYVREHKRKG RVFRHIHINH GPDLEKAIDA VKEEVSKNEF IRHKYSTRFL 360
  361 SIKLLENDPD IESFVRTLPN AGEIFRIRDK MAKRVQETMN EDCESAITDA KYGFISGALK 420
  421 ETFTDNHLEQ AQTTKVLDAI VTHRIWGYPI FFLFMYLMFE GTFVLGEYPM MGIEWLVGQI 480
  481 GDLIRNNMSE GPLKDMLVDG IVGGVGGVIV FLPNILILYF CISLMEDSGY MARAAFIMDK 540
  541 IMHKMGLHGK SFIPLIMGFG CNVPAIMASR TIENRKSRLI TMLINPLMSC SARLPIYLLL 600
  601 VGAFFPNNAS LVLLSIYAIG IFLAVLLARL FSKFLVKGDD TPFVMELPPY RMPTAKSIFR 660
  661 HTWEKGAQYL KKMGGIIMIA SIIIWFLGYY PNHEAYETVA EQQENSYIGQ LGRAIEPVIK 720
  721 PMGFDWKLGI GLISGVGAKE LVVSTLGVLY VDDPEADEAS LAERIPITPL VAFCYMLFVL 780
  781 IYFPCIAALA AIKQESGSWK WALFAACYTT GLAWLVAFSV YQIGGMFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle