YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28809162
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVWIKASAL LTLAGLTACS ASPTGRNQIL MFSDQEMSSL GAKSFDQMKK DIPISKDKKT  60
   61 NAYVQCVAKQ ITNAIPPQAG FKDWEVVVFD SDQVNAFALP GGKIGVYTGL LKVAKNQDQL 120
  121 ATVIGHEVAH VLAEHSNERL SQSQLANAGL SLANVAIGAS EYKQYQQLTM AALGVGVQYG 180
  181 VILPYGRTQE SEADIVGLEY MAKAGFNPNQ SVDLWKNMSA ASGGAQPPEF FSTHPSHSTR 240
  241 IKDLQATINK LPKYNVKAPK CG

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	262	0.99