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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28808910, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLATASIGR KLLLSFIAMA MLVMLSALIG VSGFSLVAKT ERNVVDAAIP AMIEARQVSE  60
   61 LSTRIISSVQ MLSNAQNEQE RKEAGRVLFE QLESLLTHIK ELGGESFDSK LLDALESNVQ 120
  121 NVINNLAELG VTVERKLWLA KEIDTRVEEM RLLSEELEQL TRTQVQNTST IAVANVTHIY 180
  181 DLLEANKKDQ VYQALDALVE VDLDLTERLH ELHLLAFKML NQIEEARTLT NVDRIQQIQT 240
  241 AFENNLKIMK RRVLAVEDPT RSKQMSQLLT ELGKRQVVFT ILLQQYENNE QSQQLMQKTL 300
  301 ELFSELNSTV NKLVDDSNKT TTFAVDQLTN TLKFAQWSLT VISIVGLIVV VLILWRVVYV 360
  361 SVVKRLAEYS AALLSVAQGN LAVELEVKGK DELAHMGQAI ITARNTAQAL KVVAEGEAKA 420
  421 KRELEEHKEH LEELIEQRTS QLRQANLRLN EEVVNHAQAR NEAEQASRAK SAFLATMSHE 480
  481 IRTPMNGVLG TARLLMDSGL NPIQKRYAEI INRSGKTLLA ILNDVLDYSK IEAGHLEIRR 540
  541 LGFDLHQMVE DTFQLMNSRA QEKQLLFSYH IESDVSRYWK GDVTRISQVL NNLVGNAIKF 600
  601 TEDGEIDIYV SLNPEDESQV LFEVSDTGIG ISKKDQKTLF DAFTQAEGGL NQIGGTGLGL 660
  661 AISKRIVEAM GGVLEVDSEE GEGSRFWFSI PLEESEPVEI GVVASARCKV KAKVLLVEDN 720
  721 EVNRVVAEGF LQSMGHQVVM AEDGLQAERI IDKQDFDIAL VDINLPDCDG TDLIQRLKRI 780
  781 ERNKPGDKAL SPTPMIAVSA HVFAEEVERY LAAGFDGYLP KPVEKEALAT LIQDVLDGKQ 840
  841 LLLPQSGECL PLSETSDTNL TIENQVEQDH QQREEPEMVI INPSVIQSDM KILGREKMLH 900
  901 IIDLFRNTSA DVLGQLVESA EKNDSLAVKN LAHKLKGSAG SLGLTALMNT CQSIEIAAEP 960
  961 LDTYNAQQGL LDEQVATSVN ALDELMAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle