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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28808647, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNSIKIAT IALLVGGALG FGVNQYLSGA NHDMSGTGGS AASSSNEPLY WVAPMDPNYK  60
   61 RDKPGKSPMG MDLIPVYAED LAGEQDKPGT VKIDPSVENN LGVKTAQVSL EQLSPRIETV 120
  121 GYIAFDESHL WQTNVRVAGW VEKLYINAVG EKVNKGDVLF TLYSPELVKA QEELLNAYRT 180
  181 GRSGLVKGAT ERLVTLGVDR SQIRAITQRG KASQTIEIKA PEDGVIASLN VREGGYLSPA 240
  241 QAVISAGPLE NVWVDAEVFE RQAHWMKAGS DATMTLDAIP GKEWQGSVDY VYPILDPKTR 300
  301 TLRVRLKFSN PNGELKPNMF ANIALQPVSD NAVLTIPKSS VIRSGGMTRV VLSEGDGKYR 360
  361 STRIEVGREA DDKIEVLQGL TQDDRIVTSA HFMLDSESSQ TADLSRISSP TEATAQTAWT 420
  421 KGEITDVMKG HRMLTINHQP VPEWDWPGMV MNFTLADGVD MGSLQKGQAI EFEIQKAASG 480
  481 QYEIVDYKAD DTVLATDVWV TGDISMLMAD FGMITLNHLP VSEWNWDAGE MNFSVGDEVD 540
  541 LSGFKEGQKV RFLVEKQGSD YVLKQIEAIE G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle