YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28808354
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAIASLPVF VAVVECGSFS LAAKQLNLTK SAISKRINQL EDDLGIRLLN RTTRKLSLTE  60
   61 AGERYFEYAS QALNLAQQGV DAVSELQGSP QGRLKITVPM SFGVLHIAPL ISEFLARYPK 120
  121 IEVDLTLEDK MVDLVKDGFD LGIRIGELSS SNLIAKRLAP CKSVLCASPD YLAEFGTPQK 180
  181 PSDLVSHNCL RYSYFRGGVE WMFINNGSEY KVLPKGNFIV NNSEAIRQLL LRGSGIAQLP 240
  241 TFIAGRDFAA GNLKPVMEEY SLPEHAIYAV FPERKHMPLK VRAFIDFISE KLGTDLPYWD 300
  301 RYNSPEK

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	307	0.99