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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28808305, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFTLTTLAV SVALIAGCSN QGTPTMTQYS QSQIVAQQTQ APVAKKIPHA MTIHGDTRVD  60
   61 NYYWMRDDER KDPEILQHLE QENQYAETVL KHTEALQNEL FEEIKGRIAK DDNSVPVRKG 120
  121 NYFYSSEVTG DNEYEVHLRA KDFAGKDKQV ILDVNELAKE HEFFSIGGLY VSPNENLLAY 180
  181 GEDTLSRRVY TIKIKDLTTG NYLQDEIEGA SSAVAWQNDN NAFYYIKKDP QTLLGYQVYR 240
  241 HVLGTPQSSD ELIFEETDSA YYTSLSKSKD GDEVYIWHSS TETSGVSIID ANNPKAKAEP 300
  301 FYPREDGIEY SISKLDNWYY IYTNYQAVNF RLMKVKQEEM HDRSKWQDVI AADDNTQLVD 360
  361 FELFDDHLVY EQRSNGLASV TVRQLSTGKE FPLTFNDDAF AAYLTGNFEL DNKKVRIYYS 420
  421 SLTTPGTYYD FDLKTGKSEI MKQTPVLGDF DADNYQSERI MIKARDGKEV PVSLVYRKDL 480
  481 FKKDGTNPLY QYGYGSYGAT IEPTFGSARL SLLDRGFVFA IAHIRGSEML GRPWYEDGKK 540
  541 LTKQNTFNDF IDVTKGLVEQ GYGAKDKVFA VGGSAGGLLM GAIINQAPEL YRGIGAHVPF 600
  601 VDVVTTMLDE SIPLTTNEYD EWGNPNNKTY YDYMLSYSPY DNVKAQNYPN MLVTTGLHDS 660
  661 QVQYFEPMKW VAKLREMKTD DNILLFKTDM EAGHGGASGR FKRLKEDALE YAFFLDLLNK 720
  721 K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle