YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28807954, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKANNAETPD SSNAADTFKW VAAFVLAAAA VVGNYLYGEM SVVVRAAGVV VLIAAALGVA  60
   61 ATTTKGKAAI SFAKESRMEV RKVVWPTRQE TMQTTLIVLA VSIVMALVLW GIDGIMVRLV 120
  121 ALATGV

Type	Start	End	Confidence
Cytoplasmic	1	16	0.90
Transmembrane Helix	17	37	0.91
Non-Cytoplasmic	38	43	0.74
Transmembrane Helix	44	64	0.91
Cytoplasmic	65	93	0.82
Transmembrane Helix	94	112	0.94
Non-Cytoplasmic	113	126	0.74