YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28899468, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTRGFTLME MIVTIVIGSF IMLGIAGYVQ LGMKGYADTI DRQRMQTQAQ FVLEKMSREI  60
   61 RHAVPNSFHV PTGSTNCLEF MPIEYSGFYT LTNNNLEFLL GNDSTLNPIP ADRWMVINPS 120
  121 RYEDLQSASP QSLAVGNLAK TGDVFVVSGA ASTIGGTSIS SRHYIYQNNS EVRYCFDNSQ 180
  181 ITRNGITVAD SVDTSVSDMH YLEPTLQRGG IVHINLEFTQ NGERSVYQQD VQVLNVP

Type	Start	End	Confidence
Cytoplasmic	1	10	0.67
Transmembrane Helix	11	32	0.87
Non-Cytoplasmic	33	237	0.76