YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28807343, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKWLVAFTS LLILAGCEQP ADQIHLSGPT MGTSYNIKYI EQDGIPTPKA LQTEIDRLLE  60
   61 EVNDQMSTYR EDSELSRFNQ HQTSEPFEVS AQTATVVKEA VRLNGLTLGA LDVTVGPLVN 120
  121 LWGFGPEARP DVVPSDEELA ARKANTGIHH LTVDGNKLSK DIPNLYVDLS TIAKGWGVDV 180
  181 VADYLQSVGI KNYMVEVGGE MRLKGINREG VPWRIAIEKP TVDERSIQEI IEPGDMAIAT 240
  241 SGDYRNYFES NGVRYSHIIN PQTGKPIHHK VVSVTVLDKS SMTADGLATG LMVLGEEKGM 300
  301 EIANENNIPV FMIVKTEDGF KELASEAYKP FMNK

Type	Start	End	Confidence
Signal Peptide	1	20	0.94
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	334	0.99