YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28807236, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEQLQGAD APKGKSKLLI IIIAVVVLLG GGGAAAFFLM GSDDSAQAAE AESQQTQAAA  60
   61 ANPIAYVNLP QPFIFNVTGD RRDRLVQIKA QLMVRGSENE QLARYHSPLV ESSLLSTFAS 120
  121 ATVEQLRSPT GRVELRDRAS EDIKAALNAA VGKPVIEKVL FTDFVIQ

Type	Start	End	Confidence
Cytoplasmic	1	17	0.89
Transmembrane Helix	18	40	0.89
Non-Cytoplasmic	41	167	0.82