YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28807233, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSITKRLK QITGALGLML SAPYAFAAAP SNLDLATTLG SLVLVIGVIL LLAWLLKRMQ  60
   61 VPALGQQKGL RIVSQLPVGT KERIAVVQVG EEQFLVGITS QSIQTLAKLE KPLKEEELAT 120
  121 NAFASQFSQL IKKNDKG

Type	Start	End	Confidence
Cytoplasmic	1	8	0.87
Transmembrane Helix	9	28	0.82
Non-Cytoplasmic	29	34	0.83
Transmembrane Helix	35	56	0.85
Cytoplasmic	57	137	0.91