YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28807179
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWIDFIILG VIGFSALISL VRGFAKEALS LVIWFGAFFI SSNYYAKLAV YFTNIKDDMF  60
   61 RNGAAIAALF VATLVVGAVV NYVIGQLVQK TGLSGTDRIL GMVFGGLRGV LIVSAVLFFM 120
  121 DAFTAFPSSD WWKESQLVPE FKLVIEPFFE HLQATSSFLS GTI

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.72
Transmembrane Helix	6	24	0.92
Cytoplasmic	25	30	0.67
Transmembrane Helix	31	51	0.87
Non-Cytoplasmic	52	63	0.73
Transmembrane Helix	64	85	0.94
Cytoplasmic	86	103	0.71
Transmembrane Helix	104	125	0.88
Non-Cytoplasmic	126	163	0.82