YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28806919
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCSRRNFLA SSGALILTTG VAGTSVVSAS LYASDSEQTK RFGMVHDENA CIGCTACTEA  60
   61 CREVNKVPEG VTRLKIHRSE PIGEFPDVEY QFTRESCQHC DNPPCVYVCP TGAAYKDEST 120
  121 GIVDVHKERC VGCGYCLAAC PYQVRFFNPV DHSADKCNFC RDTNLAQGKQ PACVESCPTK 180
  181 ALIFGDLNDP TSEVSKVIDN HLVYRDKSHL GTQPKLFKIP HNKGEVSS

Type	Start	End	Confidence
Signal Peptide	1	29	0.96
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	228	0.99