YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28806710
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSSESRKS RQKEVIMKTL IAVSVLSILS FGAHAERQSN EPIKVIEPIS GLDSKKIELG  60
   61 KTLWFEPRLS ASNTISCNSC HNIAKGGVDN LPSSIGHKWS IGPINSPTVF NSDLNFVQFW 120
  121 NGRAKDLQEQ AAGPIENPLE MAFTHQLAVD TLQSIPQYRK WFQQAYGSDN ITIDNVTDAI 180
  181 ATFEQTLRTP NSPFDLWLKG NDDALTTAQV EGYQLFKDKG CTACHSGPLA GGQMYQKMGL 240
  241 VKPFTTDNPD VGRKAITGSD FDKFVFKVPT LRNVELTYPY FHDGSVWDLQ EAVEMMADLQ 300
  301 LGQKLTKEES TKITEFLRSL TGEQPQVTLP HLPPSTHETA RPNI

Type	Start	End	Confidence
Signal Peptide	1	35	0.98
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	344	0.99