YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	QUEC_VIBPA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKAVVVFSG GQDSTTCLVQ ALKEFDEVHA ITFDYGQRHK LEIEVAQKIA KDLGVKAHKV  60
   61 MDVGLLNELA ISSLTRDDIP VSHELQENGL PNSFVPGRNI LFLTLAGIYA YQIGADTVIT 120
  121 GVCETDFSGY PDCRDDFVKS MNTALVKGMD RALTIKTPLM WLNKAETWAL ADQYNALQLV 180
  181 RENTLTCYNG IIGDGCGDCP SCDLRKAGLD EYLNNKDAVM KSLVQKQESE GL

Type	Start	End	Confidence
Signal Peptide	1	21	0.59
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	232	0.99