YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28806522
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKSLKLMTL RVAAACIAAT FISVGPYLHY DHQFKSANDP NVVQGPVTHP DLSHLPYIGD  60
   61 IPDFNSIKDA KEKKAAFFDF LRPKIALENH RIEKERAFLS SLEIGEVSPD EEAYAERLAQ 120
  121 LYGFPLHDGH VDEAWLTEML KRVNVLPEAL VLTQAANESA WGTSRFATQA NNLFGQWCYK 180
  181 QGCGIVPAQR AAGKTHEVQK FDSVQQSIHG YFMNVNRNPA YADLRDIRAM LADKHKNLFS 240
  241 VATASELTHG LLSYSERGIA YVNDLRSMIR HNNAYWTQ

Type	Start	End	Confidence
Signal Peptide	1	26	0.57
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	278	0.99