YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28806491
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIALTLAA TSITLVSYSA FSAQDAEHVR LATTTSTYHS GLLDYLLPQF EKDTGYKVDV  60
   61 IAAGTGKALK MGENGDVDLV MTHAPKAEGT FVEKGYGVLP RKLMYNDFVI VGPKADPAKI 120
  121 KDDESVLDVF KEIANKNATF ISRGDDSGTH KKEMGFWAQT KIEPNFGGYR SVGQGMGPTL 180
  181 NMASEMQGYT MSDRGTWLAY QNKLDLEILF QGDEKLFNPY QVILVNPERY PTINYQGAKA 240
  241 FSDWLVNPRG QELINGFRLN GKQLFVANAE SK

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	272	0.99