YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28897949, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSHQHGDVS MNNRELYRDP VNGKISGVCA GFANYFGAEV WLIRIVVISA ALLGGTFLVV  60
   61 LAYIAMAFML EKQPVRYSEN IREQQEHTLK SKPWQKGQSP DQLLSVLERD FDRLDGKIRN 120
  121 MEAYVTSDTF RVNREFSKL

Type	Start	End	Confidence
Cytoplasmic	1	20	0.70
Transmembrane Helix	21	38	0.54
Non-Cytoplasmic	39	44	0.51
Transmembrane Helix	45	67	0.91
Cytoplasmic	68	139	0.79