YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28805758, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYFTITSTT LTMTICRALF TKYAKSIGIL LSMFSFFVHS ATDNQIEQIK LAAEQHILAT  60
   61 VEQPAGGELT VNAADIDSRI KATDCPEPLD TSASSTSSTR SNINVLVECP ADDWKVYVPV 120
  121 RVSSSVPMIV ATRQLGRGEI ISASDVTTSM IELQRFRKDG FSSFEQVVGA KLKRSVRLGD 180
  181 VVERNDVCVV CRNEKVTIKA VKSGMTITTQ GTALQDGATG DQVRVKNDKS QRIIEGIVTD 240
  241 IAEITVTF

Type	Start	End	Confidence
Signal Peptide	1	18	0.50
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	248	0.93