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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28805741
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKPSLIAAS VIATLAGCSA LQSSEQQVVN SLADNLDIQY QVLTNHGANE GLACQDLGAE  60
   61 WASCNKVNMT LVNQGEAVNS KDWAIYFHSI RLILDVDNEQ FKISRVTGDL HKLEPTDKFD 120
  121 GFAAGEEVVL PLIGEYWQLF ETDFMPGAFV AAPNAEPKMI ASLNTEDVAS FVTGLEGNNL 180
  181 KRTPDDNNIF ASAVSRFEKN DDLVKQDVST TLLPTPMHVE AGKGKVDITE GIALPKDVFD 240
  241 AAQFAAIQDR AEVVGVDVRG DLPVSITVVP ADFTGELAKS GAYEMSINGD GIAIKAFDKV 300
  301 GAFYAVQSIF GLVDSQNADS LPQLSIQDAP RFDYRGVMVD VARNFHSKDA ILATLDQMAA 360
  361 YKMNKLHLHL TDDEGWRLEI PGLPELTEVG SNRCFDLEEK SCLLPQLGSG STSDNFGSGY 420
  421 FSKADYVEIL KYAKARNIEV IPEIDMPAHA RAAVISMEAR YNRLIEEGKE AEANEYRLMD 480
  481 PQDTSNVTTV QFYNKQSFIN PCMESSTRFV DKVISEVAAM HTEAGAPLTT WHFGGDEAKN 540
  541 IKLGAGFQDV NAQDKVSWKG TIDLSKQDKP FAQSPQCQTL IADGTVSDFG HLPSHFAEQV 600
  601 SKIVAEKGIP SFQAWQDGLK YSEGEKAFAT ENTRVNFWDV LYWGGTSSVY EWSKKGYDVI 660
  661 VSNPDYVYMD MPYEVDPKER GYYWATRATD TRKMFGFAPE NMPQNAETSV DRDGNGFTGK 720
  721 GEIAAKPFYG LSAQLWSETV RNDEQFEYMV FPRVLAAAER AWHRAEWEND YKVGVEYSQN 780
  781 SNLVDKASLN QDYNRFANVL GQRELAKLEK SGIDYRLPVP GAKVEDGKLA MNVQFPGVKL 840
  841 QYSLDGKNWL NYVDNARPNV KGEVFIRSVS ATGEKTSRVT SVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle