YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28805682
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNIILVSLV TLLSFPTLAE TCGQHLDKGI PSSNSDQFLC RDGYAVGYNY NTKNADWVAY  60
   61 HITAESVNIT NKRSNAFQED TEMPDYARST LADYKGSGYD RGHLAPSATM DFTQESMKQS 120
  121 FLMSNMSPQL PGFNRVGWRV LEEHVRDLAN EYNELYVVTG PIYQGNEGTI GNGVVIPSAF 180
  181 YKVILDPSFD EAIAFIVPHR DVSSSELANF ITTIDEVERQ TGLDFFAQTP DSIEDNMESV 240
  241 QWEEMWPTNQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	250	0.99