YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28805424, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNAPLNNGR RRFLTATTAV VGGLGAVAVA VPFIKSWNPS AKAKAAGAPV EVDISKIEPG  60
   61 QLVRVEWQGK PVWIVRRTQS VLDNLKTISD KLRDPQSEME QQPEYAQNEF RSIKEEYFVA 120
  121 VGFCTHLGCS PTYLPDSFSE QVQGVRSGFF CPCHGSKFDM AGRVFQGVPA PLNLVVPKHM 180
  181 YLSDTKLIVG VDEGDA

Type	Start	End	Confidence
Signal Peptide	1	30	0.71
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	196	0.95