YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28805122
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRQRGVAL IIVLMLLAIM ATIAATMSER LFLQFQRGSN QIHYQQAYWY SVGVEALAEV  60
   61 GIEQSYKDSD TINLSQPWAI KEQVYPLDYG QAAGRIWDKQ ACFNLNVLSR VQPTGQQTTR 120
  121 PYLVQVLQRL LEESDVEPYQ AEVIADSTWE YIDSDSTVRS TTGVEDSTYE SMKPSYLAAN 180
  181 GWMADKTELR AVYQVSGEIY QKIEPLVCAI PSDDWRLNVN TIEVEQAPIL VAMFSPNLSS 240
  241 SDAVQLIEKR PFDGWDSVDE FLAESELTGL SDDVKKNAKG YLGVDSSFFE LDAQVLVDDS 300
  301 RVRIRSLLQS TNRETVTVVR RRFGGISERV SDRSAE

Type	Start	End	Confidence
Signal Peptide	1	24	0.75
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	336	0.99