YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28805121
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRSKPNRAN KRRTAEGFTL IEVLVSIAIF ASLSVAAYQV VSQVQRSNEL SQERTQRLNE  60
   61 LQRAMVMMDN DFRQMALRQT RTNGEDPAGQ LIFWSDYLLD SDAKGLMFAR VGWHNPQQQF 120
  121 PRGEVTKVGY RVKEETLQRV WWRYPDTPVG QEGIVTPLLT QVESFDMRFY DGKQWKKEWD 180
  181 SNKELPKAVS VVLKLKDYGE IARTYLTPDG KLAESERNKA SEGNNNG

Type	Start	End	Confidence
Cytoplasmic	1	17	0.85
Transmembrane Helix	18	41	0.79
Non-Cytoplasmic	42	227	0.99